hirisplexr: From 'PLINK' to 'HIrisPlex'
Read 'PLINK' 1.9 binary datasets (BED/BIM/FAM) and generate the CSV files required by the Erasmus MC 'HIrisPlex' / 'HIrisPlex-S' webtool <https://hirisplex.erasmusmc.nl/>. It maps 'PLINK' alleles to the webtool's required 'rsID_Allele' columns (0/1/2/NA). No external tools (e.g., 'PLINK CLI') are required.
| Version: | 0.1.0 |
| Depends: | R (≥ 3.6) |
| Imports: | BEDMatrix, data.table, utils |
| Suggests: | testthat (≥ 3.0.0), knitr, rmarkdown |
| Published: | 2025-10-31 |
| DOI: | 10.32614/CRAN.package.hirisplexr (may not be active yet) |
| Author: | Andrea Giardina 
[aut, cre] |
| Maintainer: | Andrea Giardina <andrea.giardina1 at open.ac.uk> |
| BugReports: | https://github.com/adhikari-statgen-lab/hirisplexr/issues |
| License: | MIT + file LICENSE |
| URL: | https://github.com/adhikari-statgen-lab/hirisplexr |
| NeedsCompilation: | no |
| Materials: | README, NEWS |
| CRAN checks: | hirisplexr results |
Documentation:
| Reference manual: | hirisplexr.html , hirisplexr.pdf |
| Vignettes: |
From PLINK to HIrisPlex (source, R code) |
Downloads:
| Package source: | hirisplexr_0.1.0.tar.gz |
| Windows binaries: | r-devel: not available, r-release: not available, r-oldrel: not available |
| macOS binaries: | r-release (arm64): hirisplexr_0.1.0.tgz, r-oldrel (arm64): not available, r-release (x86_64): hirisplexr_0.1.0.tgz, r-oldrel (x86_64): hirisplexr_0.1.0.tgz |
Linking:
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