Last updated on 2025-09-14 04:49:40 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.70 | 260.40 | 274.10 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 11.16 | 210.32 | 221.48 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 336.39 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 408.21 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 184.00 | 204.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 13.34 | 239.71 | 253.05 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.39 | 239.08 | 253.47 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 191.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 18.00 | 187.00 | 205.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 179.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 242.00 | 265.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [80s/135s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.546, system: 0.055, elapsed: 2.905 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.065, system: 0.098, elapsed: 15.309 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.015, elapsed: 0.304 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.722, system: 0.190, elapsed: 6.425 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.003, elapsed: 0.311 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.239, system: 0.384, elapsed: 26.282 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.509, system: 0.036, elapsed: 2.517 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.047, system: 0.096, elapsed: 16.560 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.014, elapsed: 0.332 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.785, system: 0.172, elapsed: 6.307 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.003, elapsed: 0.285 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.230, system: 0.340, elapsed: 26.909 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.590, system: 0.037, elapsed: 2.891 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.025, system: 0.086, elapsed: 14.536 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.012, elapsed: 0.361 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.780, system: 0.187, elapsed: 6.699 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.005, elapsed: 0.327 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.126, system: 0.211, elapsed: 1.046 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.528, system: 0.559, elapsed: 27.015 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.482, system: 0.035, elapsed: 2.809 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.072, system: 0.104, elapsed: 15.117 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.013, elapsed: 0.609 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.702, system: 0.175, elapsed: 8.624 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.003, elapsed: 0.249 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.358, system: 0.473, elapsed: 18.688 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.617, system: 0.833, elapsed: 47.276 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/119s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.500, system: 0.037, elapsed: 2.450 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.824, system: 0.047, elapsed: 14.107 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.179, system: 0.013, elapsed: 0.322 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.478, system: 0.168, elapsed: 6.028 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.004, elapsed: 0.280 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.663, system: 0.288, elapsed: 24.014 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.554, system: 0.036, elapsed: 2.938 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.871, system: 0.111, elapsed: 15.370 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.016, elapsed: 0.398 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.759, system: 0.194, elapsed: 5.751 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.005, elapsed: 0.268 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.076, system: 0.388, elapsed: 25.686 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.611, system: 0.049, elapsed: 2.466 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.837, system: 0.137, elapsed: 10.903 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.011, elapsed: 0.252 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.598, system: 0.174, elapsed: 5.334 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.011, elapsed: 0.241 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.066, system: 0.236, elapsed: 0.975 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.090, system: 0.651, elapsed: 21.116 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.507, system: 0.034, elapsed: 2.185 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.942, system: 0.083, elapsed: 11.672 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.011, elapsed: 0.313 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.648, system: 0.171, elapsed: 6.271 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.005, elapsed: 0.238 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 9.959, system: 0.437, elapsed: 18.152 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.062, system: 0.770, elapsed: 39.848 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64