Last updated on 2026-02-11 03:50:20 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | OK | ||||
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 12.01 | 250.58 | 262.59 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 26.00 | 298.75 | 324.75 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 31.00 | 341.80 | 372.80 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 21.00 | 195.00 | 216.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 13.62 | 258.92 | 272.54 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.16 | 252.72 | 266.88 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 14.00 | 879.00 | 893.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 22.00 | 189.00 | 211.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 12.00 | 871.00 | 883.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 25.00 | 245.00 | 270.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [2m/13m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.758, system: 0.114, elapsed: 5.288 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.186, system: 0.483, elapsed: 27.215 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.229, system: 0.032, elapsed: 1.020 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.707, system: 1.108, elapsed: 20.520 seconds]
Computing values for grid cells...
... done. [user: 0.194, system: 0.019, elapsed: 0.591 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.685, system: 1.806, elapsed: 56.124 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 2.257, system: 0.235, elapsed: 11.175 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.214, system: 0.381, elapsed: 43.949 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.234, system: 0.032, elapsed: 1.439 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.504, system: 2.103, elapsed: 176.976 seconds]
Computing values for grid cells...
... done. [user: 0.186, system: 0.014, elapsed: 0.699 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 22.165, system: 3.266, elapsed: 237.547 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.720, system: 0.073, elapsed: 5.783 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.803, system: 0.153, elapsed: 31.608 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.336, system: 0.030, elapsed: 1.943 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.576, system: 2.474, elapsed: 168.406 seconds]
Computing values for grid cells...
... done. [user: 0.205, system: 0.025, elapsed: 0.931 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
2 1 3 4
... computing probabilities from permuted values ...
... done. [user: 1.369, system: 0.465, elapsed: 3.627 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 22.828, system: 3.579, elapsed: 215.875 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.713, system: 0.109, elapsed: 6.360 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.203, system: 0.334, elapsed: 35.418 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.230, system: 0.039, elapsed: 1.279 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.970, system: 2.550, elapsed: 180.473 seconds]
Computing values for grid cells...
... done. [user: 0.209, system: 0.025, elapsed: 0.456 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 12.103, system: 0.951, elapsed: 42.754 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 33.335, system: 4.714, elapsed: 271.385 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [2m/13m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.666, system: 0.054, elapsed: 5.007 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.925, system: 0.214, elapsed: 33.820 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.230, system: 0.025, elapsed: 1.362 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.687, system: 1.239, elapsed: 177.095 seconds]
Computing values for grid cells...
... done. [user: 0.188, system: 0.013, elapsed: 0.677 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.329, system: 1.710, elapsed: 220.496 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.793, system: 0.085, elapsed: 7.865 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.895, system: 0.177, elapsed: 34.851 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.220, system: 0.026, elapsed: 1.405 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.692, system: 2.413, elapsed: 181.102 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.012, elapsed: 0.514 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.467, system: 3.095, elapsed: 229.138 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.800, system: 0.102, elapsed: 5.826 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.149, system: 0.291, elapsed: 34.459 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.235, system: 0.042, elapsed: 1.432 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.163, system: 2.767, elapsed: 174.041 seconds]
Computing values for grid cells...
... done. [user: 0.191, system: 0.030, elapsed: 0.398 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.311, system: 0.416, elapsed: 2.188 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 22.709, system: 4.243, elapsed: 222.051 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.763, system: 0.086, elapsed: 4.381 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.049, system: 0.303, elapsed: 23.185 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.231, system: 0.037, elapsed: 1.099 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.489, system: 1.111, elapsed: 18.972 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.009, elapsed: 0.260 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 15.471, system: 1.131, elapsed: 36.432 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 37.029, system: 2.993, elapsed: 86.370 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64