Annotation              Annotates cell populations found using
                        CytomeTree.
CytofTree               Binary tree algorithm for mass cytometry data
                        analysis.
CytomeTree              Binary tree algorithm for cytometry data
                        analysis.
DLBCL                   Diffuse large B-cell lymphoma data set from the
                        FlowCAP-I challenge.
FmeasureC               C++ implementation of the F-measure computation
FmeasureC_no0           C++ implementation of the F-measure computation
                        without the reference class labeled "0"
HIPC                    HIPC T cell panel data set from HIPC program,
                        patient 1369. The data was analyzed and gated
                        by Stanford.
IMdata                  Influenza vaccine response dataset
RetrievePops            Retrieve cell populations found using
                        Annotation.
bootstrapCI             Bootstrapped Confidence Interval.
cytometree-package      cytometree: Automated Cytometry Gating and
                        Annotation
plot_cytopop            Plot the cell count for each population using
                        CytomeTree.
plot_graph              Plot the binary tree built using CytomeTree.
plot_nodes              Plot the distribution of the observed cells at
                        each node of the binary tree built using
                        CytomeTree.
