RPPASPACE-package	rs00-RPPASPACE-package
CobsFitClass-class	rs09-CobsFitClass-class
coef,FitClass-method	rs07-FitClass-class
coef,LogisticFitClass-method	rs08-LogisticFitClass-class
coef,RPPAFit-method	rs05-RPPAFit-class
coefficients,FitClass-method	rs07-FitClass-class
coefficients,LogisticFitClass-method	rs08-LogisticFitClass-class
coefficients,RPPAFit-method	rs05-RPPAFit-class
coerce,character,Directory-method	rs98-Directory-class
coerce,Directory,character-method	rs98-Directory-class
dim,RPPA-method	rs01-RPPA-class
Directory	rs98-Directory-class
Directory-class	rs98-Directory-class
DS5RPPAPreFitQC-class	rs22-DS5RPPAPreFitQC-class
FitClass-class	rs07-FitClass-class
fitCurveAndSummarizeFromSettings	rs98-RPPASPACESettings-class
fitSeries,CobsFitClass-method	rs09-CobsFitClass-class
fitSeries,FitClass-method	rs07-FitClass-class
fitSeries,LoessFitClass-method	rs10-LoessFitClass-class
fitSeries,LogisticFitClass-method	rs08-LogisticFitClass-class
fitSlide,CobsFitClass-method	rs09-CobsFitClass-class
fitSlide,FitClass-method	rs07-FitClass-class
fitSlide,LoessFitClass-method	rs10-LoessFitClass-class
fitSlide,LogisticFitClass-method	rs08-LogisticFitClass-class
fitted,CobsFitClass-method	rs09-CobsFitClass-class
fitted,FitClass-method	rs07-FitClass-class
fitted,LoessFitClass-method	rs10-LoessFitClass-class
fitted,LogisticFitClass-method	rs08-LogisticFitClass-class
fitted,RPPAFit-method	rs05-RPPAFit-class
getConfidenceInterval	rs13-getConfidenceInterval
getRegisteredMethod	rs90-registrationMethods
getRegisteredMethodKeys	rs90-registrationMethods
getRegisteredModel	rs80-registerModel
getRegisteredModelKeys	rs80-registerModel
getRegisteredModelLabel	rs80-registerModel
getRegisteredNormalizationMethod	rs80-registerNormalizationMethod
getRegisteredNormalizationMethodKeys	rs80-registerNormalizationMethod
getRegisteredNormalizationMethodLabel	rs80-registerNormalizationMethod
getRegisteredObject	rs90-registrationMethods
getRegisteredObjectKeys	rs90-registrationMethods
hist,RPPAFit-method	rs05-RPPAFit-class
image,RPPA-method	rs01-RPPA-class
image,RPPAFit-method	rs05-RPPAFit-class
is.Directory	rs98-Directory-class
is.FitClass	rs07-FitClass-class
is.RPPA	rs01-RPPA-class
is.RPPADesignParams	rs02-RPPADesignParams-class
is.RPPAFit	rs06-RPPAFitParams-class
is.RPPAFitParams	rs06-RPPAFitParams-class
is.RPPANormalizationParams	rs19-RPPANormalizationParams-class
is.RPPAPreFitQC	rs21-RPPAPreFitQC-class
is.RPPASet	rs11-RPPASet-class
is.RPPASetSummary	rs12-RPPASetSummary-class
is.RPPASPACESettings	rs98-RPPASPACESettings-class
is.RPPASpatialParams	rs20-RPPASpatialParams-class
LoessFitClass-class	rs10-LoessFitClass-class
LogisticFitClass-class	rs08-LogisticFitClass-class
normalize	rs99-normalize-method
normalize,ANY-method	rs99-normalize-method
normalize,MatrixLike-method	rs15-normalize
normalize,NULL-method	rs99-normalize-method
normalize,RPPASet-method	rs11-RPPASet-class
normalize-method	rs99-normalize-method
paramString	rs99-paramString-method
paramString,ANY-method	rs99-paramString-method
paramString,RPPADesignParams-method	rs02-RPPADesignParams-class
paramString,RPPAFitParams-method	rs06-RPPAFitParams-class
paramString,RPPANormalizationParams-method	rs19-RPPANormalizationParams-class
paramString,RPPASPACESettings-method	rs98-RPPASPACESettings-class
paramString,RPPASpatialParams-method	rs20-RPPASpatialParams-class
paramString-method	rs99-paramString-method
plot,RPPA,ANY-method	rs01-RPPA-class
plot,RPPA-method	rs02-RPPADesignParams-class
plot,RPPADesignParams-method	rs02-RPPADesignParams-class
plot,RPPAFit,missing-method	rs05-RPPAFit-class
qcprob	rs99-qcprob-method
qcprob,ANY-method	rs99-qcprob-method
qcprob,DS5RPPAPreFitQC-method	rs22-DS5RPPAPreFitQC-class
qcprob,NULL-method	rs99-qcprob-method
qcprob,RPPAPreFitQC-method	rs21-RPPAPreFitQC-class
qcprob-method	rs99-qcprob-method
registerClassname	rs90-registrationMethods
registerMethod	rs90-registrationMethods
registerModel	rs80-registerModel
registerNormalizationMethod	rs80-registerNormalizationMethod
resid,RPPAFit-method	rs05-RPPAFit-class
residuals,RPPAFit-method	rs05-RPPAFit-class
RPPA	rs01-RPPA-class
RPPA-class	rs01-RPPA-class
RPPADesignParams	rs02-RPPADesignParams-class
RPPADesignParams-class	rs02-RPPADesignParams-class
RPPAFit	rs06-RPPAFitParams-class
RPPAFit-class	rs05-RPPAFit-class
RPPAFitFromParams	rs06-RPPAFitParams-class
RPPAFitParams	rs06-RPPAFitParams-class
RPPAFitParams-class	rs06-RPPAFitParams-class
RPPANormalizationParams	rs19-RPPANormalizationParams-class
RPPANormalizationParams-class	rs19-RPPANormalizationParams-class
RPPAPreFitQC	rs21-RPPAPreFitQC-class
RPPAPreFitQC-class	rs21-RPPAPreFitQC-class
RPPASet	rs11-RPPASet-class
RPPASet-class	rs11-RPPASet-class
RPPASetSummary	rs12-RPPASetSummary-class
RPPASetSummary-class	rs12-RPPASetSummary-class
RPPASPACESettings	rs98-RPPASPACESettings-class
RPPASPACESettings-class	rs98-RPPASPACESettings-class
RPPASpatialParams	rs20-RPPASpatialParams-class
RPPASpatialParams-class	rs20-RPPASpatialParams-class
seriesNames	rs01-RPPA-class
seriesToUseToMakeCurve	rs01-RPPA-class
spatialAdjustment	rs14-spatialCorrection
spatialAdjustmentFromParams	rs14-spatialCorrection
spatialCorrection	rs14-spatialCorrection
summary,DS5RPPAPreFitQC-method	rs22-DS5RPPAPreFitQC-class
summary,RPPA-method	rs01-RPPA-class
summary,RPPAFit-method	rs05-RPPAFit-class
summary,RPPAPreFitQC-method	rs21-RPPAPreFitQC-class
summary,RPPASet-method	rs11-RPPASet-class
trimConc,CobsFitClass-method	rs09-CobsFitClass-class
trimConc,FitClass-method	rs07-FitClass-class
trimConc,LoessFitClass-method	rs10-LoessFitClass-class
trimConc,LogisticFitClass-method	rs08-LogisticFitClass-class
write.summary	rs99-write.summary-method
write.summary,ANY-method	rs99-write.summary-method
write.summary,RPPASet-method	rs11-RPPASet-class
write.summary,RPPASetSummary-method	rs12-RPPASetSummary-class
write.summary,RPPASPACESettings-method	rs98-RPPASPACESettings-class
write.summary-method	rs99-write.summary-method
