Package: PeakSegJoint
Maintainer: Toby Dylan Hocking <toby.hocking@r-project.org>
Author: Toby Dylan Hocking
Version: 2024.1.24
License: GPL-3
URL: https://github.com/tdhock/PeakSegJoint
BugReports: https://github.com/tdhock/PeakSegJoint/issues
Title: Joint Peak Detection in Several ChIP-Seq Samples
Description: Jointly segment several ChIP-seq samples to find the peaks 
 which are the same and different across samples. The fast approximate
 maximum Poisson likelihood algorithm is described in
 "PeakSegJoint: fast supervised peak detection via joint segmentation
 of multiple count data samples"
 <arXiv:1506.01286> by TD Hocking and G Bourque.
Suggests: testthat, ggplot2 (>= 2.0), microbenchmark
Depends: R (>= 2.14)
Imports: PeakError, parallel, penaltyLearning
NeedsCompilation: yes
Packaged: 2024-01-24 18:17:40 UTC; th798
Repository: CRAN
Date/Publication: 2024-01-24 19:00:02 UTC
Built: R 4.2.3; aarch64-apple-darwin20; 2024-01-24 22:27:37 UTC; unix
Archs: PeakSegJoint.so.dSYM
